PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr018265.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 279aa    MW: 32083.6 Da    PI: 6.2861
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr018265.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM125.64e-3951111106
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                  +ppGfrFhPt+eelv +yLk+k+++ +++l +vi ++d+yk+ePwd+++     ++e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+vls 
  Pbr018265.1   5 VPPGFRFHPTEEELVGYYLKRKINSLHIDL-DVIVDIDLYKIEPWDIQArcrLGYSEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVLS- 100
                  69****************************.99**************953543344778**************************************. PP

          NAM  96 kgelvglkktL 106
                  k++ +g++ktL
  Pbr018265.1 101 KDNIIGMRKTL 111
                  8899******9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.97E-423123IPR003441NAC domain
PROSITE profilePS5100536.0715182IPR003441NAC domain
PfamPF023655.2E-196111IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MESCVPPGFR FHPTEEELVG YYLKRKINSL HIDLDVIVDI DLYKIEPWDI QARCRLGYSE  60
QNEWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKAVLS KDNIIGMRKT LEEGWVVCRA  120
FKKPSPSHRQ GFEAWKHAYV RDHPSSSNFS SEIPMVINPN QGFHQSFGSE EDHFVSNNIF  180
LGNQLMELPQ LESPTISTSF VTKENVLRSN NISTDDYEAE RSNNNSSNQH IDWRNLDNLL  240
EVQLTDRASF SHPSLSSASQ NYEQETQKNH LLGCFQDL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-32211112118Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ9199620.0KJ919962.1 Eriobotrya japonica NAC1 transcription factor (NAC1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009375287.10.0PREDICTED: NAC domain-containing protein 7-like
RefseqXP_009375290.10.0PREDICTED: NAC domain-containing protein 7-like
SwissprotQ9C8W96e-92NAC30_ARATH; NAC domain-containing protein 30
TrEMBLA0A0H3VAL90.0A0A0H3VAL9_9R
STRINGPOPTR_0013s11740.11e-111(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71383247
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.16e-72vascular related NAC-domain protein 7